Category Archives: Python

Manhattan plots for SNP marker effects using ggplot2

Posted on June 17, 2010 by jcole

At AIPL, we’ve been posting Manhattan plots of the marker effects for each breed-trait combination with each official release of our genomic predictions. For example, consider the plot of lifetime net merit for Holsteins from the April, 2010 run: These … Continue reading →

Posted in Python, R, ggplot2, matplotlib | Leave a comment